生物科学

电子邮箱

zhouchao@ctgu.edu.cn

招收专业

生物学，计算机科学与技术

研究方向

生物信息学，表观遗传学，生物人工智能

个人简介

周超，博士（毕业于华中农业大学），教授（校聘），硕士生导师，湖北省生物信息学会理事，湖北省药理学会中药药理专业委员会委员，中药材信息化育种宜昌市重点实验室负责人，入选湖北省省级人才计划。

主要从事生物信息学和表观遗传学的研究，研究方向为高通量组学数据分析、数据库可视化以及深度学习模型预测，相关成果以第一作者或通讯作者发表论文10余篇，其中代表性论文发表在Nature Plants，Nucleic Acids Research，Plant Physiology，Plant communications等国际著名刊物上，其中影响因子超过15分2篇。主持国家自然科学基金项目1项，湖北省教育厅项目1项等。

主要研究论文

以发表时间顺序列出，仅列出第一作者#或通讯作者*：

1. Lanlan Zheng^#, Chao Zhou^#, Tonghui Li, Zhu Yuan, Hanlin Zhou, Yosuke Tamada,Yongheng Zhao, Jing Wang, Qian Zheng, Xincai Hao, Ping Huang, Xiangyin Luo,Xiao Xiao, Lei You, Qinhua Chen, Zhubing Hu, Xuanbin Wang, Kun Meng,Guodong Wang^*, Yonghong Zhang^*, Chen Li^*. Global transcriptome analysis reveals dynamic gene expression profiling and provides insights into biosynthesis of resveratrol and anthraquinones in a medicinal plant Polygonum cuspidatum. Industrial Crops & Products. 2021; 171(1)

2. Chao Zhou^#*, Xiaoyun Liu^#, Xinglei Li^#, Hanlin Zhou, Sijia Wang, Zhu Yuan, Yonghong Zhang, Sanhe Li, Aiqing You, Lei Zhou^*, Zhengquan He^*. A genome doubling event reshapes rice morphology and products by modulating chromatin signatures and gene expression profiling. Rice (N Y). 2021 Aug 4;14(1):72.

3. Lanlan Zheng, Chen Li, Xueping Ma, Hanlin Zhou, Yuan Liu, Ping Wang, Huilan Yang, Yosuke Tamada, Ji Huang, Chunfei Wang, Zhubing Hu, Xuening Wang, Guodong Wang, Haihong Li, Juntao Hu, Xiaoyun Liu^*, Chao Zhou^*, Yonghong Zhang^*. Functional interplay of histone lysine 2-hydroxyisobutyrylation and acetylation in Arabidopsis under dark-induced starvation. Nucleic Acids Research. 2021 Jul 21;49(13):7347-7360.

4. Chao Zhou^#, Sijia Wang^#, Hanlin Zhou, Zhu Yuan, Tao Zhou, Yonghong Zhang, Sen Xiang, Fang Yang, Xiangling shen, Dechun Zhang^*. Transcriptome sequencing analysis of sorghum callus with various regeneration capacities. Planta. 2021 Jul 21;254(2):33.

5. Xiaoyun Liu, Junling Luo, Tiantian Li, Huilan Yang, Ping Wang, Lufang Su, Yu Zheng, Chun Bao, Chao Zhou^*. SDG711 Is Involved in Rice Seed Development through Regulation of Starch Metabolism Gene Expression in Coordination with Other Histone Modifications. Rice (N Y). 2021 Mar 5;14(1):25.

6. Chao Zhou^*, Hanlin Zhou, Xueping Ma, Huilan Yang, Ping Wang, Guodong Wang, Lanlan Zheng, Yonghong Zhang^*, Xiaoyun Liu^*. Genome-Wide Identification and Characterization of Main Histone Modifications in Sorghum Decipher Regulatory Mechanisms Involved by mRNA and Long Noncoding RNA Genes. Journal of Agricultural and Food Chemistry. 2021 Feb 24;69(7):2337-2347.

7. Chao Zhou*, Zhu Yuan, Xueping Ma, Huilan Yang, Ping Wang, Lanlan Zheng, Yonghong Zhang*, Xiaoyun Liu*. Accessible chromatin regions and their functional interrelations with gene transcription and epigenetic modifications in sorghum genome. Plant communications. 2021 Jan 11; 2(1): 100140.

8. 季艳丽，程云伟，陈发菊，张德春，周超^*。高粱不同类型胚性和非胚性愈伤组织的生理生化差异。广西植物。2019，39（12）：1613-1618。

9. Chao Zhou, Changshi Wang, Hongbo Liu, Qiangwei Zhou, Qian Liu, Yan Guo, Ting Peng, Jiaming Song, Jianwei Zhang, Lingling Chen, Yu Zhao, Zhixiong Zeng and Dao-Xiu Zhou^*. Identification and analysis of adenine N6-methylation sites in the rice genome. Nature Plants. 2018 Aug;4(8):554-563.

10. 周超，赵毓，周少立，周道绣*。水稻表观基因研究进展。生命科学。2016，28（10）：1138-1146。

11. Shaoli Zhou^#, Xiaoyun Liu^#, Chao Zhou^#, Qiangwei Zhou, Yu Zhao, Guoliang Li, and Dao-Xiu Zhou^*. Cooperation between the H3K27me3 Chromatin Mark and Non-CG Methylation in Epigenetic Regulation. Plant Physiology. 2016 Oct;172(2):1131-1141.

12. Feng Tan^#, Chao Zhou^# , Qiangwei Zhou^#, Shaoli Zhou, Wenjing Yang, Yu Zhao, Guoliang Li, and Dao-Xiu Zhou^*. Analysis of Chromatin Regulators Reveals Specific Features of Rice DNA Methylation Pathways. Plant Physiology. 2016 Jul;171(3):2041-54.

近五年科研项目

1. SbALKBH1A介导DNA 6mA影响高粱胚性愈伤再生能力的机制研究，国家自然科学基金（31900427），2020.01-2022.12，主持。

2.  DNA腺嘌呤修饰对高粱花粉发育的表观调控机制研究，湖北省教育厅科学技术研究计划优秀中青年人才项目（Q20191207），2019.01-2020.12，主持。

3.  三峡大学高层次人才科研启动基金， 2018.10-2021.09，主持。